Information for 15-GAAKATTCTC (Motif 13)


Reverse Opposite:

p-value:1e-47
log p-value:-1.095e+02
Information Content per bp:1.648
Number of Target Sequences with motif2345.0
Percentage of Target Sequences with motif45.28%
Number of Background Sequences with motif15620.1
Percentage of Background Sequences with motif35.43%
Average Position of motif in Targets410.1 +/- 275.6bp
Average Position of motif in Background376.8 +/- 229.4bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.76
Offset:-7
Orientation:forward strand
Alignment:-------GAAKATTCTC---
NNTTCTGGAANNTTCTAGAA

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:2
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----GAAKATTCTC
TTCTAGAABNTTCTA

MA0486.1_HSF1/Jaspar

Match Rank:3
Score:0.70
Offset:-6
Orientation:forward strand
Alignment:------GAAKATTCTC
CTTCTAGAAGGTTCT-

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GAAKATTCTC
ATGMATATDC--

MA0164.1_Nr2e3/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GAAKATTCTC
-AAGCTTG--

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GAAKATTCTC
GGAAATTCCC

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GAAKATTCTC
NGAAGC-----

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:8
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------GAAKATTCTC
ADGGYAGYAGCATCT-

PB0002.1_Arid5a_1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GAAKATTCTC---
CTAATATTGCTAAA

MA0041.1_Foxd3/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GAAKATTCTC
AAACAAACATTC--