Information for 17-TGTGGAGGAG (Motif 17)


Reverse Opposite:

p-value:1e-41
log p-value:-9.541e+01
Information Content per bp:1.829
Number of Target Sequences with motif931.0
Percentage of Target Sequences with motif17.98%
Number of Background Sequences with motif5083.2
Percentage of Background Sequences with motif11.53%
Average Position of motif in Targets410.3 +/- 286.1bp
Average Position of motif in Background379.8 +/- 221.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0130.1_ZNF354C/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TGTGGAGGAG
-GTGGAT---

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TGTGGAGGAG--
--GGGAGGACNG

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGTGGAGGAG
TGCGTGGGYG

MA0162.2_EGR1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGTGGAGGAG----
GGCGGGGGCGGGGG

MA0079.3_SP1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGTGGAGGAG-
GGGGGCGGGGC

PB0202.1_Zfp410_2/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TGTGGAGGAG---
NNTNNGGGGCGGNGNGN

MA0528.1_ZNF263/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TGTGGAGGAG--------------
---GGAGGAGGAGGGGGAGGAGGA

PB0010.1_Egr1_1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGTGGAGGAG--
ANTGCGGGGGCGGN

PB0110.1_Bcl6b_2/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TGTGGAGGAG--
NNTNAGGGGCGGNNNN

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TGTGGAGGAG
NNHTGTGGTTWN-