Information for 21-GCTTCCCT (Motif 20)


Reverse Opposite:

p-value:1e-23
log p-value:-5.397e+01
Information Content per bp:1.741
Number of Target Sequences with motif1853.0
Percentage of Target Sequences with motif35.78%
Number of Background Sequences with motif12907.7
Percentage of Background Sequences with motif29.28%
Average Position of motif in Targets409.6 +/- 276.4bp
Average Position of motif in Background371.9 +/- 230.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:forward strand
Alignment:GCTTCCCT
GCTTCC--

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GCTTCCCT-
NNACTTGCCTT

MA0136.1_ELF5/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCTTCCCT
TACTTCCTT

MA0471.1_E2F6/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCTTCCCT---
NCTTCCCGCCC

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCTTCCCT-
NNACTTACCTN

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCTTCCCT--
ACTTCCTGBT

PB0058.1_Sfpi1_1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCTTCCCT----
NNACTTCCTCTTNN

MA0598.1_EHF/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCTTCCCT-
-CCTTCCTG

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCTTCCCT--
ACTTCCTBGT

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:10
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GCTTCCCT--
GTCATGCHTGRCTGS