Information for 24-TTCGTCAC (Motif 21)


Reverse Opposite:

p-value:1e-18
log p-value:-4.216e+01
Information Content per bp:1.907
Number of Target Sequences with motif768.0
Percentage of Target Sequences with motif14.83%
Number of Background Sequences with motif4771.0
Percentage of Background Sequences with motif10.82%
Average Position of motif in Targets412.6 +/- 268.8bp
Average Position of motif in Background373.8 +/- 229.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0108.1_Atf1_2/Jaspar

Match Rank:1
Score:0.81
Offset:-4
Orientation:reverse strand
Alignment:----TTCGTCAC--
NTTATTCGTCATNC

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:2
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----TTCGTCAC---
NNAATTAGTCACGGT

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:3
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TTCGTCAC
-ACGTCA-

MA0067.1_Pax2/Jaspar

Match Rank:4
Score:0.71
Offset:2
Orientation:forward strand
Alignment:TTCGTCAC--
--AGTCACGC

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:5
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:TTCGTCAC-
---GTCATN

MA0490.1_JUNB/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTCGTCAC--
ATGAGTCATCN

MA0099.2_JUN::FOS/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTCGTCAC
TGAGTCA-

MA0018.2_CREB1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTCGTCAC
TGACGTCA-

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTCGTCAC-
TGACGTCATC

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:10
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TTCGTCAC-
NNATGASTCATH