Information for 21-GCTACTGCAGCT (Motif 22)


Reverse Opposite:

p-value:1e-10
log p-value:-2.376e+01
Information Content per bp:1.530
Number of Target Sequences with motif2850.0
Percentage of Target Sequences with motif55.03%
Number of Background Sequences with motif22275.4
Percentage of Background Sequences with motif50.53%
Average Position of motif in Targets407.6 +/- 273.9bp
Average Position of motif in Background375.6 +/- 248.5bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.58
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0051.1_Osr2_1/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----GCTACTGCAGCT
CNNNGCTACTGTANNN

PB0050.1_Osr1_1/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----GCTACTGCAGCT
TNNTGCTACTGTNNNN

MA0522.1_Tcf3/Jaspar

Match Rank:3
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:GCTACTGCAGCT---
----NTGCAGCTGTG

MA0500.1_Myog/Jaspar

Match Rank:4
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GCTACTGCAGCT---
----NNGCAGCTGTC

MA0521.1_Tcf12/Jaspar

Match Rank:5
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GCTACTGCAGCT---
----NNGCAGCTGTT

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GCTACTGCAGCT--
----CAGCAGCTGN

PB0003.1_Ascl2_1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCTACTGCAGCT------
-NNNNAGCAGCTGCTGAN

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GCTACTGCAGCT---
---NNAGCAGCTGCT

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCTACTGCAGCT
GGGATTGCATNN

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:10
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:GCTACTGCAGCT----
------GCAGCTGTNN