Information for 24-GGAGATGTCTAT (Motif 25)


Reverse Opposite:

p-value:1e-3
log p-value:-8.305e+00
Information Content per bp:1.980
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.06%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets575.4 +/- 183.3bp
Average Position of motif in Background645.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)3.1
Multiplicity (# of sites on avg that occur together)6.33
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0126.1_Gata5_2/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GGAGATGTCTAT--
GACAGAGATATCAGTGT

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGAGATGTCTAT---
NNAGATNVNWATCTN

PH0102.1_Meis1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGAGATGTCTAT--
AACGAGCTGTCAATAC

PH0170.1_Tgif2/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGAGATGTCTAT--
AACTAGCTGTCAATAC

PH0169.1_Tgif1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GGAGATGTCTAT---
NNNCAGCTGTCAATATN

PH0104.1_Meis2/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGAGATGTCTAT--
AAAGACCTGTCAATAC

PH0140.1_Pknox1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGAGATGTCTAT--
AAAGACCTGTCAATCC

PH0141.1_Pknox2/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GGAGATGTCTAT--
AAGCACCTGTCAATAT

PH0105.1_Meis3/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGAGATGTCTAT--
AATTACCTGTCAATAC

PB0117.1_Eomes_2/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGAGATGTCTAT--
GCGGAGGTGTCGCCTC