Information for 3-CCDCCCACRY (Motif 3)


Reverse Opposite:

p-value:1e-211
log p-value:-4.874e+02
Information Content per bp:1.668
Number of Target Sequences with motif2559.0
Percentage of Target Sequences with motif49.41%
Number of Background Sequences with motif12718.5
Percentage of Background Sequences with motif28.85%
Average Position of motif in Targets402.1 +/- 252.6bp
Average Position of motif in Background373.8 +/- 222.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.42
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:1
Score:0.94
Offset:-1
Orientation:reverse strand
Alignment:-CCDCCCACRY-
YCCGCCCACGCN

MA0472.1_EGR2/Jaspar

Match Rank:2
Score:0.90
Offset:-3
Orientation:forward strand
Alignment:---CCDCCCACRY--
CCCCCGCCCACGCAC

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.88
Offset:1
Orientation:reverse strand
Alignment:CCDCCCACRY-
-CRCCCACGCA

MA0162.2_EGR1/Jaspar

Match Rank:4
Score:0.81
Offset:-3
Orientation:forward strand
Alignment:---CCDCCCACRY-
CCCCCGCCCCCGCC

PB0010.1_Egr1_1/Jaspar

Match Rank:5
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-CCDCCCACRY---
TCCGCCCCCGCATT

PB0114.1_Egr1_2/Jaspar

Match Rank:6
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CCDCCCACRY----
NNAGTCCCACTCNNNN

PB0076.1_Sp4_1/Jaspar

Match Rank:7
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----CCDCCCACRY---
GGTCCCGCCCCCTTCTC

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:8
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CCDCCCACRY
GGACCACCCACG-

POL003.1_GC-box/Jaspar

Match Rank:9
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----CCDCCCACRY
NAGCCCCGCCCCCN-

MA0079.3_SP1/Jaspar

Match Rank:10
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CCDCCCACRY
GCCCCGCCCCC--