Information for 4-CYWAAAATAG (Motif 4)


Reverse Opposite:

p-value:1e-153
log p-value:-3.529e+02
Information Content per bp:1.571
Number of Target Sequences with motif1665.0
Percentage of Target Sequences with motif32.15%
Number of Background Sequences with motif7524.8
Percentage of Background Sequences with motif17.07%
Average Position of motif in Targets413.0 +/- 258.4bp
Average Position of motif in Background370.6 +/- 227.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.26
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.97
Offset:0
Orientation:forward strand
Alignment:CYWAAAATAG
CCAAAAATAG

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.96
Offset:-1
Orientation:forward strand
Alignment:-CYWAAAATAG-
DCYAAAAATAGM

MA0052.2_MEF2A/Jaspar

Match Rank:3
Score:0.93
Offset:-2
Orientation:forward strand
Alignment:--CYWAAAATAG---
AGCTAAAAATAGCAT

MA0497.1_MEF2C/Jaspar

Match Rank:4
Score:0.93
Offset:-3
Orientation:forward strand
Alignment:---CYWAAAATAG--
ATGCTAAAAATAGAA

MF0008.1_MADS_class/Jaspar

Match Rank:5
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:CYWAAAATAG
CCATATATGG

MA0033.1_FOXL1/Jaspar

Match Rank:6
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CYWAAAATAG
-TATACATA-

MA0075.1_Prrx2/Jaspar

Match Rank:7
Score:0.69
Offset:4
Orientation:forward strand
Alignment:CYWAAAATAG
----AATTA-

MA0132.1_Pdx1/Jaspar

Match Rank:8
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:CYWAAAATAG
----AATTAG

Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer

Match Rank:9
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CYWAAAATAG-
---TAATTAGN

POL012.1_TATA-Box/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CYWAAAATAG-----
GTATAAAAGGCGGGG