Information for 5-NNNTTAYRTAAN (Motif 5)


Reverse Opposite:

p-value:1e-108
log p-value:-2.491e+02
Information Content per bp:1.676
Number of Target Sequences with motif584.0
Percentage of Target Sequences with motif11.28%
Number of Background Sequences with motif1753.2
Percentage of Background Sequences with motif3.98%
Average Position of motif in Targets424.9 +/- 260.6bp
Average Position of motif in Background378.3 +/- 227.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0025.1_NFIL3/Jaspar

Match Rank:1
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:NNNTTAYRTAAN
ANGTTACATAA-

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:2
Score:0.89
Offset:2
Orientation:forward strand
Alignment:NNNTTAYRTAAN
--ATTGCATAA-

MA0043.1_HLF/Jaspar

Match Rank:3
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:NNNTTAYRTAAN-
-NATTACGTAACC

MA0102.3_CEBPA/Jaspar

Match Rank:4
Score:0.73
Offset:2
Orientation:forward strand
Alignment:NNNTTAYRTAAN-
--ATTGCACAATA

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.72
Offset:2
Orientation:forward strand
Alignment:NNNTTAYRTAAN
--ATTGCGCAAC

MA0466.1_CEBPB/Jaspar

Match Rank:6
Score:0.69
Offset:1
Orientation:forward strand
Alignment:NNNTTAYRTAAN
-TATTGCACAAT

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:7
Score:0.67
Offset:2
Orientation:forward strand
Alignment:NNNTTAYRTAAN
--ATTGCATCAT

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:8
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:NNNTTAYRTAAN
--ATTGCATCAK

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:NNNTTAYRTAAN-
---TGACGTCATC

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.65
Offset:1
Orientation:forward strand
Alignment:NNNTTAYRTAAN
-ATTTGCATAA-