Information for 9-ATTTAGCADC (Motif 9)


Reverse Opposite:

p-value:1e-65
log p-value:-1.518e+02
Information Content per bp:1.468
Number of Target Sequences with motif2857.0
Percentage of Target Sequences with motif55.17%
Number of Background Sequences with motif19062.0
Percentage of Background Sequences with motif43.24%
Average Position of motif in Targets412.6 +/- 275.8bp
Average Position of motif in Background372.4 +/- 233.2bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.49
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:ATTTAGCADC-
-ATTTGCATAA

PH0145.1_Pou2f3/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---ATTTAGCADC---
TNTAATTTGCATACNA

PH0144.1_Pou2f2/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---ATTTAGCADC---
TNTAATTTGCATANNN

PB0145.1_Mafb_2/Jaspar

Match Rank:4
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---ATTTAGCADC--
ANATTTTTGCAANTN

MA0507.1_POU2F2/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--ATTTAGCADC-
TTCATTTGCATAT

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:ATTTAGCADC-
-ATTTGCATAT

MA0496.1_MAFK/Jaspar

Match Rank:7
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---ATTTAGCADC--
CTGAGTCAGCAATTT

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ATTTAGCADC
TGAGTCAGCA--

MA0495.1_MAFF/Jaspar

Match Rank:9
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----ATTTAGCADC----
GCTGAGTCAGCAATTTTT

MA0161.1_NFIC/Jaspar

Match Rank:10
Score:0.63
Offset:2
Orientation:forward strand
Alignment:ATTTAGCADC
--TTGGCA--