Information for 12-AAATGTNCTACC (Motif 13)


Reverse Opposite:

p-value:1e-9
log p-value:-2.126e+01
Information Content per bp:1.773
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif4.85%
Number of Background Sequences with motif225.5
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets348.6 +/- 199.3bp
Average Position of motif in Background329.8 +/- 193.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0171.1_Sox18_2/Jaspar

Match Rank:1
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----AAATGTNCTACC
NNNNTGAATTCANNNC-

MA0090.1_TEAD1/Jaspar

Match Rank:2
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----AAATGTNCTACC
CNGAGGAATGTG-----

PB0194.1_Zbtb12_2/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AAATGTNCTACC----
-AGNGTTCTAATGANN

PB0154.1_Osr1_2/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AAATGTNCTACC------
--ACATGCTACCTAATAC

PB0155.1_Osr2_2/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AAATGTNCTACC------
--ACTTGCTACCTACACC

PB0096.1_Zfp187_1/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AAATGTNCTACC--
TTATGTACTAATAA

PH0083.1_Irx3_1/Jaspar

Match Rank:7
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----AAATGTNCTACC
AAAATACATGTAATACT

PH0162.1_Six2/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AAATGTNCTACC-----
ANANGTGATACCCCATT

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AAATGTNCTACC
AGATGCAATCCC

MA0113.2_NR3C1/Jaspar

Match Rank:10
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------AAATGTNCTACC
AGAACAGAATGTTCT---