Information for 13-ATGCAATTGTCA (Motif 14)


Reverse Opposite:

p-value:1e-9
log p-value:-2.115e+01
Information Content per bp:1.746
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif4.85%
Number of Background Sequences with motif227.8
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets291.3 +/- 195.2bp
Average Position of motif in Background337.2 +/- 193.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0165.1_Sox11_2/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:forward strand
Alignment:ATGCAATTGTCA----
--AAAATTGTTATGAA

PB0175.1_Sox4_2/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-ATGCAATTGTCA----
GGAAAAATTGTTAGGAA

MA0507.1_POU2F2/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--ATGCAATTGTCA
ATATGCAAATNNN-

PB0068.1_Sox1_1/Jaspar

Match Rank:4
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----ATGCAATTGTCA
NNNTATTGAATTGNNN

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ATGCAATTGTCA
AGATGCAATCCC--

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ATGCAATTGTCA
TTATGCAAAT----

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--ATGCAATTGTCA
ATATGCAAAT----

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:8
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---ATGCAATTGTCA
MTGATGCAAT-----

PB0172.1_Sox1_2/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ATGCAATTGTCA---
CTATAATTGTTAGCG

PB0146.1_Mafk_2/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ATGCAATTGTCA-
CCTTGCAATTTTTNN