Information for 14-AAAGTAGCTACC (Motif 15)


Reverse Opposite:

p-value:1e-8
log p-value:-2.056e+01
Information Content per bp:1.793
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif3.36%
Number of Background Sequences with motif82.7
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets291.2 +/- 146.7bp
Average Position of motif in Background339.2 +/- 205.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0050.1_Osr1_1/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----AAAGTAGCTACC
ATTTACAGTAGCAAAA

PB0051.1_Osr2_1/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----AAAGTAGCTACC
ATGTACAGTAGCAAAG

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AAAGTAGCTACC
ADGGYAGYAGCATCT

PB0154.1_Osr1_2/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AAAGTAGCTACC------
--ACATGCTACCTAATAC

PB0155.1_Osr2_2/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AAAGTAGCTACC------
--ACTTGCTACCTACACC

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.57
Offset:6
Orientation:forward strand
Alignment:AAAGTAGCTACC
------GCTTCC

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.55
Offset:6
Orientation:forward strand
Alignment:AAAGTAGCTACC
------GCTCCG

PH0053.1_Hoxa6/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AAAGTAGCTACC----
AAGGTAATTACCTAAT

MA0497.1_MEF2C/Jaspar

Match Rank:9
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------AAAGTAGCTACC
ATGCTAAAAATAGAA---

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----AAAGTAGCTACC
DCYAAAAATAGM----