Information for 18-TCCCTTCTGCAC (Motif 19)


Reverse Opposite:

p-value:1e-7
log p-value:-1.646e+01
Information Content per bp:1.745
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif7.09%
Number of Background Sequences with motif768.9
Percentage of Background Sequences with motif1.57%
Average Position of motif in Targets323.4 +/- 171.6bp
Average Position of motif in Background339.2 +/- 203.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TCCCTTCTGCAC
NNGCACCTTTCTCC--

PB0200.1_Zfp187_2/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TCCCTTCTGCAC--
GAGCCCTTGTCCCTAA

PB0128.1_Gcm1_2/Jaspar

Match Rank:3
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TCCCTTCTGCAC-
NTCNTCCCCTATNNGNN

PB0104.1_Zscan4_1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TCCCTTCTGCAC------
-TACATGTGCACATAAAA

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TCCCTTCTGCAC
GTTTCACTTCCG---

PB0026.1_Gm397_1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TCCCTTCTGCAC------
-CAGATGTGCACATACGT

MA0469.1_E2F3/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TCCCTTCTGCAC--
CTCCCGCCCCCACTC

MA0109.1_Hltf/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TCCCTTCTGCAC
AACCTTATAT--

SA0003.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----TCCCTTCTGCAC---
CCTTTACCCTTCTTCACCTT

PB0044.1_Mtf1_1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TCCCTTCTGCAC---
GGGCCGTGTGCAAAAA