Information for 2-TAGCAGATGG (Motif 2)


Reverse Opposite:

p-value:1e-37
log p-value:-8.525e+01
Information Content per bp:1.664
Number of Target Sequences with motif122.0
Percentage of Target Sequences with motif45.52%
Number of Background Sequences with motif6517.8
Percentage of Background Sequences with motif13.28%
Average Position of motif in Targets343.3 +/- 188.3bp
Average Position of motif in Background332.3 +/- 209.5bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.89
Offset:1
Orientation:reverse strand
Alignment:TAGCAGATGG-
-AACAGATGGC

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:2
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:TAGCAGATGG-
-AACAKATGGY

MA0461.1_Atoh1/Jaspar

Match Rank:3
Score:0.84
Offset:3
Orientation:forward strand
Alignment:TAGCAGATGG-
---CAGATGGC

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:4
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-TAGCAGATGG-
VNAVCAGCTGGC

MA0091.1_TAL1::TCF3/Jaspar

Match Rank:5
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:TAGCAGATGG---
-AACAGATGGTCN

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:6
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--TAGCAGATGG-----
AAGGCCAGATGGTCCGG

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:7
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-TAGCAGATGG-
NNVVCAGCTGBN

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.74
Offset:1
Orientation:forward strand
Alignment:TAGCAGATGG
-ANCAGCTG-

MA0058.2_MAX/Jaspar

Match Rank:9
Score:0.73
Offset:0
Orientation:forward strand
Alignment:TAGCAGATGG
AAGCACATGG

MA0522.1_Tcf3/Jaspar

Match Rank:10
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TAGCAGATGG-
NTGCAGCTGTG