Information for 19-WGAGGGAGAGGY (Motif 20)


Reverse Opposite:

p-value:1e-6
log p-value:-1.611e+01
Information Content per bp:1.706
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif8.58%
Number of Background Sequences with motif1133.8
Percentage of Background Sequences with motif2.31%
Average Position of motif in Targets269.1 +/- 217.8bp
Average Position of motif in Background337.3 +/- 204.1bp
Strand Bias (log2 ratio + to - strand density)-1.4
Multiplicity (# of sites on avg that occur together)1.26
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:WGAGGGAGAGGY
AGAGGAAGTG--

MA0080.3_Spi1/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----WGAGGGAGAGGY
AAAAAGAGGAAGTGA-

MA0474.1_Erg/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:WGAGGGAGAGGY
ACAGGAAGTGG-

MA0471.1_E2F6/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-WGAGGGAGAGGY
GGGCGGGAAGG--

MA0598.1_EHF/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:WGAGGGAGAGGY
-CAGGAAGG---

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:WGAGGGAGAGGY
TGAGTGACAGSC

MA0599.1_KLF5/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:WGAGGGAGAGGY
--GGGGNGGGGC

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:WGAGGGAGAGGY
GGCGGGAARN--

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:WGAGGGAGAGGY
--DGGGYGKGGC

MA0039.2_Klf4/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:WGAGGGAGAGGY
--TGGGTGGGGC