Information for 8-ATTTTCGC (Motif 22)


Reverse Opposite:

p-value:1e-6
log p-value:-1.438e+01
Information Content per bp:1.593
Number of Target Sequences with motif161.0
Percentage of Target Sequences with motif60.07%
Number of Background Sequences with motif22118.1
Percentage of Background Sequences with motif45.07%
Average Position of motif in Targets349.0 +/- 232.3bp
Average Position of motif in Background334.3 +/- 206.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.53
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:ATTTTCGC-----
-TTTTCGCGCGAA

PB0145.1_Mafb_2/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--ATTTTCGC-----
ANATTTTTGCAANTN

PB0186.1_Tcf3_2/Jaspar

Match Rank:3
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----ATTTTCGC--
NNTTTNTTTTNGNNN

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ATTTTCGC----
ACTTTCACTTTC

MA0158.1_HOXA5/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ATTTTCGC
AATTAGTG-

MA0152.1_NFATC2/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ATTTTCGC
-TTTTCCA

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ATTTTCGC-
KCTATTTTTRGH

PB0075.1_Sp100_1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ATTTTCGC-----
ATTTTCCGNNAAAT

MA0497.1_MEF2C/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----ATTTTCGC---
TTCTATTTTTAGNNN

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ATTTTCGC
CTATTTTTGG