Information for 22-CGGGGGTGGCAG (Motif 24)


Reverse Opposite:

p-value:1e-5
log p-value:-1.312e+01
Information Content per bp:1.922
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.87%
Number of Background Sequences with motif36.1
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets316.6 +/- 228.8bp
Average Position of motif in Background313.6 +/- 207.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0162.2_EGR1/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--CGGGGGTGGCAG
GGCGGGGGCGGGGG

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CGGGGGTGGCAG
DGGGYGKGGC--

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CGGGGGTGGCAG
TGGGTGTGGC--

MA0039.2_Klf4/Jaspar

Match Rank:4
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CGGGGGTGGCAG
TGGGTGGGGC--

PB0010.1_Egr1_1/Jaspar

Match Rank:5
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----CGGGGGTGGCAG
ANTGCGGGGGCGGN--

MA0493.1_Klf1/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CGGGGGTGGCAG
TGGGTGTGGCN-

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CGGGGGTGGCAG
-GGGGGGGG---

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CGGGGGTGGCAG
NTGGGTGTGGCC-

PB0100.1_Zfp740_1/Jaspar

Match Rank:9
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CGGGGGTGGCAG
NANNTGGGGGGGGNGN

MA0599.1_KLF5/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CGGGGGTGGCAG
GGGGNGGGGC--