Information for 10-CTCAGAAT (Motif 25)


Reverse Opposite:

p-value:1e-5
log p-value:-1.239e+01
Information Content per bp:1.951
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif16.04%
Number of Background Sequences with motif3783.3
Percentage of Background Sequences with motif7.71%
Average Position of motif in Targets334.9 +/- 186.6bp
Average Position of motif in Background340.3 +/- 209.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:1
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CTCAGAAT-
TTTCTNAGAAAN

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CTCAGAAT
TTCCKNAGAA-

MA0519.1_Stat5a::Stat5b/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CTCAGAAT
ATTTCCAAGAA-

MA0496.1_MAFK/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CTCAGAAT---
CTGAGTCAGCAATTT

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:5
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CTCAGAAT
ATGACTCAGCAD

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CTCAGAAT
TGAGTCAGCA-

MA0495.1_MAFF/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CTCAGAAT-----
GCTGAGTCAGCAATTTTT

MA0591.1_Bach1::Mafk/Jaspar

Match Rank:8
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------CTCAGAAT
AGGATGACTCAGCAC

MA0520.1_Stat6/Jaspar

Match Rank:9
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------CTCAGAAT-
CATTTCCTGAGAAAT

Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CTCAGAAT---
ATGACTCAGCANWWT