Information for 6-TAAAATGAGGTG (Motif 6)


Reverse Opposite:

p-value:1e-11
log p-value:-2.570e+01
Information Content per bp:1.747
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif6.34%
Number of Background Sequences with motif328.7
Percentage of Background Sequences with motif0.67%
Average Position of motif in Targets362.4 +/- 169.6bp
Average Position of motif in Background342.9 +/- 205.6bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0152.1_Pou6f1_2/Jaspar

Match Rank:1
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---TAAAATGAGGTG--
AAACATAATGAGGTTGC

PH0151.1_Pou6f1_1/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---TAAAATGAGGTG--
GACGATAATGAGCTTGC

MA0596.1_SREBF2/Jaspar

Match Rank:3
Score:0.64
Offset:4
Orientation:forward strand
Alignment:TAAAATGAGGTG--
----ATGGGGTGAT

MA0595.1_SREBF1/Jaspar

Match Rank:4
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TAAAATGAGGTG--
----GTGGGGTGAT

PB0132.1_Hbp1_2/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TAAAATGAGGTG-
NNTNNACAATGGGANNN

PB0098.1_Zfp410_1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TAAAATGAGGTG-----
TATTATGGGATGGATAA

MA0492.1_JUND_(var.2)/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TAAAATGAGGTG---
AAAGATGATGTCATC

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TAAAATGAGGTG--
----ATGGGGTGAT

MA0078.1_Sox17/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TAAAATGAGGTG
GACAATGNN---

MA0488.1_JUN/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TAAAATGAGGTG--
-AAGATGATGTCAT