Information for 8-TTTGGAATAAAT (Motif 9)


Reverse Opposite:

p-value:1e-10
log p-value:-2.363e+01
Information Content per bp:1.725
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif9.70%
Number of Background Sequences with motif978.6
Percentage of Background Sequences with motif1.99%
Average Position of motif in Targets280.9 +/- 177.2bp
Average Position of motif in Background342.6 +/- 198.1bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0152.1_NFATC2/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TTTGGAATAAAT
--TGGAAAA---

PB0187.1_Tcf7_2/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TTTGGAATAAAT
NNNTTTNTAATACNG

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:3
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TTTGGAATAAAT-
---GTCATAAAAN

MA0485.1_Hoxc9/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TTTGGAATAAAT---
--GGCCATAAATCAC

PH0046.1_Hoxa10/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TTTGGAATAAAT----
TAGGTAATAAAATTCA

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TTTGGAATAAAT
GGTCTGGCAT----

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TTTGGAATAAAT
NCTGGAATGC--

MA0465.1_CDX2/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TTTGGAATAAAT
-AAGCCATAAAA

PB0028.1_Hbp1_1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TTTGGAATAAAT---
ACTATGAATGAATGAT

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TTTGGAATAAAT--
--GGCCATAAATCA