Information for 10-TGACCCACAATG (Motif 10)


Reverse Opposite:

p-value:1e-6
log p-value:-1.454e+01
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif8.00%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets344.0 +/- 20.0bp
Average Position of motif in Background300.7 +/- 54.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0078.1_Sox17/Jaspar

Match Rank:1
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:TGACCCACAATG--
-----GACAATGNN

MA0442.1_SOX10/Jaspar

Match Rank:2
Score:0.65
Offset:6
Orientation:reverse strand
Alignment:TGACCCACAATG
------ACAAAG

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGACCCACAATG
TGACCT------

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:4
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TGACCCACAATG-
---VRRACAAWGG

PB0201.1_Zfp281_2/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TGACCCACAATG--
AGGAGACCCCCAATTTG

PB0168.1_Sox14_2/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGACCCACAATG----
-CTCACACAATGGCGC

PB0153.1_Nr2f2_2/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TGACCCACAATG
NNNNTGACCCGGCGCG

MA0071.1_RORA_1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGACCCACAATG
TGACCTTGAT--

MA0099.2_JUN::FOS/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGACCCACAATG
TGACTCA-----

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TGACCCACAATG-
---RNAACAATGG