Information for 14-CCTCGGTGTGCA (Motif 14)


Reverse Opposite:

p-value:1e-6
log p-value:-1.454e+01
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif8.00%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets663.0 +/- 449.0bp
Average Position of motif in Background409.0 +/- 86.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0009.1_T/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CCTCGGTGTGCA
-CTAGGTGTGAA

PB0044.1_Mtf1_1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CCTCGGTGTGCA----
GGGCCGTGTGCAAAAA

PB0104.1_Zscan4_1/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CCTCGGTGTGCA-------
--TACATGTGCACATAAAA

PB0026.1_Gm397_1/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CCTCGGTGTGCA-------
--CAGATGTGCACATACGT

PB0013.1_Eomes_1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCTCGGTGTGCA----
GAAAAGGTGTGAAAATT

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CCTCGGTGTGCA-
-NTGGGTGTGGCC

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CCTCGGTGTGCA
--TGGGTGTGGC

MA0493.1_Klf1/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CCTCGGTGTGCA-
--TGGGTGTGGCN

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CCTCGGTGTGCA---
CCATTGTATGCAAAT

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:10
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CCTCGGTGTGCA-
---AGGTGTTAAT