Information for 9-ATTACACGAC (Motif 22)


Reverse Opposite:

p-value:1e-3
log p-value:-7.595e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.00%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets370.0 +/- 0.0bp
Average Position of motif in Background391.6 +/- 126.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0179.1_Sp100_2/Jaspar

Match Rank:1
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--ATTACACGAC---
NNTTTANNCGACGNA

MA0466.1_CEBPB/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-ATTACACGAC
TATTGCACAAT

PH0077.1_Hoxd12/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---ATTACACGAC----
NNNATTTTACGACNNTN

MA0102.3_CEBPA/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ATTACACGAC-
ATTGCACAATA

PH0076.1_Hoxd11/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---ATTACACGAC----
ANNATTTTACGACNTNA

PH0066.1_Hoxc11/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ATTACACGAC----
NNNTTTTACGACNTTN

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ATTACACGAC
ATTGCATAA-

PH0047.1_Hoxa11/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ATTACACGAC----
NNGTTTTACGACTTTA

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ATTACACGAC
ATTGCGCAAC

PH0067.1_Hoxc12/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---ATTACACGAC----
GNNNTTTTACGACCTNA