Information for 10-TTTTGACGCG (Motif 23)


Reverse Opposite:

p-value:1e-3
log p-value:-7.595e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.00%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets466.0 +/- 0.0bp
Average Position of motif in Background47.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TTTTGACGCG--
TTTTCGCGCGAA

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:2
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TTTTGACGCG
---TGACGT-

PH0048.1_Hoxa13/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTTTGACGCG----
ANATTTTACGAGNNNN

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTTTGACGCG
DTTTCCCGCC

PH0068.1_Hoxc13/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TTTTGACGCG----
NAATTTTACGAGNTNN

PB0197.1_Zfp105_2/Jaspar

Match Rank:6
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------TTTTGACGCG-
NAAANTTATTGAANCAN

MA0018.2_CREB1/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TTTTGACGCG-
---TGACGTCA

PB0153.1_Nr2f2_2/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TTTTGACGCG-----
NNNNTGACCCGGCGCG

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TTTTGACGCG-
VDTTTCCCGCCA

PH0134.1_Pbx1/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TTTTGACGCG---
NNNNNATTGATGNGTGN