Information for 17-AAGCATCCCATT (Motif 25)


Reverse Opposite:

p-value:1e-3
log p-value:-7.595e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.00%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets116.0 +/- 0.0bp
Average Position of motif in Background464.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0098.1_Zfp410_1/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--AAGCATCCCATT---
NNNTCCATCCCATAANN

PB0181.1_Spdef_2/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AAGCATCCCATT--
GATAACATCCTAGTAG

MA0596.1_SREBF2/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AAGCATCCCATT
-ATCACCCCAT-

PB0132.1_Hbp1_2/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AAGCATCCCATT-------
--TGTTCCCATTGTGTACT

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AAGCATCCCATT
--GCATTCCAGN

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AAGCATCCCATT
-ATCACCCCAT-

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AAGCATCCCATT
--RCATTCCWGG

MA0595.1_SREBF1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AAGCATCCCATT
-ATCACCCCAC-

MA0164.1_Nr2e3/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AAGCATCCCATT
CAAGCTT------

PH0126.1_Obox6/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-AAGCATCCCATT--
CNATAATCCGNTTNT