Information for 18-CGCGGTGATTGG (Motif 26)


Reverse Opposite:

p-value:1e-3
log p-value:-7.595e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.00%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets128.0 +/- 0.0bp
Average Position of motif in Background316.6 +/- 139.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:CGCGGTGATTGG
-GCAGTGATTT-

MA0038.1_Gfi1/Jaspar

Match Rank:2
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CGCGGTGATTGG
--CNGTGATTTN

MA0060.2_NFYA/Jaspar

Match Rank:3
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CGCGGTGATTGG----
AGAGTGCTGATTGGTCCA

MA0483.1_Gfi1b/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CGCGGTGATTGG
TGCTGTGATTT-

MA0502.1_NFYB/Jaspar

Match Rank:5
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:CGCGGTGATTGG-------
----CTGATTGGTCNATTT

POL004.1_CCAAT-box/Jaspar

Match Rank:6
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:CGCGGTGATTGG-----
-----TGATTGGCTANN

PH0026.1_Duxbl/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CGCGGTGATTGG----
NNNNGTTGATTGGGTCG

NFY(CCAAT)/Promoter/Homer

Match Rank:8
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CGCGGTGATTGG--
----CCGATTGGCT

PH0109.1_Nkx1-1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CGCGGTGATTGG----
NCCCACTAATTAGCGCA

PH0024.1_Dlx5/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CGCGGTGATTGG-----
-GGGGTAATTAGCTCTG