Information for 14-TCGGTTAACG (Motif 29)


Reverse Opposite:

p-value:1e-2
log p-value:-6.902e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.00%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets25.0 +/- 0.0bp
Average Position of motif in Background493.9 +/- 40.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0081.1_Tcf1_1/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---TCGGTTAACG----
NNNTTAGTTAACTNANN

PH0167.1_Tcf1/Jaspar

Match Rank:2
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---TCGGTTAACG----
NTTTTAGTTAACNNAGN

PB0109.1_Bbx_2/Jaspar

Match Rank:3
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---TCGGTTAACG----
NNNNCTGTTAACNNTNN

PH0168.1_Hnf1b/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TCGGTTAACG------
AGCTGTTAACTAGCCGT

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TCGGTTAACG
TGTCGGTT----

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TCGGTTAACG
BRRCVGTTDN--

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TCGGTTAACG
GGCVGTTR---

PB0179.1_Sp100_2/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TCGGTTAACG-
TCCGTCGCTTAAAAG

PB0135.1_Hoxa3_2/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TCGGTTAACG
AAAAACCATTAAGG

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TCGGTTAACG
-CTGTTTAC-