Information for 19-CAACACCCTAGC (Motif 31)


Reverse Opposite:

p-value:1e-2
log p-value:-6.902e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.00%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets265.0 +/- 0.0bp
Average Position of motif in Background243.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0493.1_Klf1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CAACACCCTAGC
GGCCACACCCA---

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CAACACCCTAGC
GGCCACACCCAN--

PB0181.1_Spdef_2/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CAACACCCTAGC--
GATAACATCCTAGTAG

MA0133.1_BRCA1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CAACACCCTAGC
ACAACAC------

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CAACACCCTAGC
GCCACACCCA---

MA0039.2_Klf4/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CAACACCCTAGC
GCCCCACCCA---

PB0117.1_Eomes_2/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CAACACCCTAGC
NNGGCGACACCTCNNN

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CAACACCCTAGC
GCCMCRCCCH---

MA0599.1_KLF5/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CAACACCCTAGC
GCCCCGCCCC---

PB0055.1_Rfx4_1/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CAACACCCTAGC------
---TACCATAGCAACGGT