Information for 20-CATCTTAGAGCA (Motif 32)


Reverse Opposite:

p-value:1e-2
log p-value:-6.902e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.00%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets30.0 +/- 0.0bp
Average Position of motif in Background526.0 +/- 154.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0181.1_Spdef_2/Jaspar

Match Rank:1
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CATCTTAGAGCA
GATAACATCCTAGTAG-

MA0095.2_YY1/Jaspar

Match Rank:2
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----CATCTTAGAGCA
GCNGCCATCTTG-----

PB0194.1_Zbtb12_2/Jaspar

Match Rank:3
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CATCTTAGAGCA--
TATCATTAGAACGCT

MA0106.2_TP53/Jaspar

Match Rank:4
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CATCTTAGAGCA---
CATGTCTGGGCATGT

PH0158.1_Rhox11_2/Jaspar

Match Rank:5
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CATCTTAGAGCA----
TCNCTTTACAGCGNNNT

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:6
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---CATCTTAGAGCA
GGTCANYTGAGGWCA

PH0157.1_Rhox11_1/Jaspar

Match Rank:7
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CATCTTAGAGCA----
TCNNTTTACAGCGNNNT

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.49
Offset:7
Orientation:forward strand
Alignment:CATCTTAGAGCA
-------CAGCC

PB0099.1_Zfp691_1/Jaspar

Match Rank:9
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:CATCTTAGAGCA-------
--NNNNTGAGCACTGTNNG

YY1(Zf)/Promoter/Homer

Match Rank:10
Score:0.49
Offset:-5
Orientation:reverse strand
Alignment:-----CATCTTAGAGCA
GCCGCCATCTTG-----