Information for 21-GAACAAGGATGC (Motif 33)


Reverse Opposite:

p-value:1e-2
log p-value:-6.902e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.00%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets75.0 +/- 0.0bp
Average Position of motif in Background250.6 +/- 100.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GAACAAGGATGC
GGAACAAAGR---

PB0200.1_Zfp187_2/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----GAACAAGGATGC
NNAGGGACAAGGGCNC

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GAACAAGGATGC
VRRACAAWGG---

PB0181.1_Spdef_2/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GAACAAGGATGC----
CTACTAGGATGTNNTN

PB0071.1_Sox4_1/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GAACAAGGATGC-
AGAAGAACAAAGGACTA

PB0061.1_Sox11_1/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GAACAAGGATGC-
ATAAGAACAAAGGACTA

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GAACAAGGATGC
--ANCAGGATGT

MA0515.1_Sox6/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GAACAAGGATGC
AAAACAATGG---

MA0442.1_SOX10/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GAACAAGGATGC
--ACAAAG----

PB0062.1_Sox12_1/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GAACAAGGATGC
NTTNAGAACAATTA---