Information for 22-GATAGGCAACCC (Motif 34)


Reverse Opposite:

p-value:1e-2
log p-value:-6.902e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.00%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets88.0 +/- 0.0bp
Average Position of motif in Background356.0 +/- 73.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0133.1_BRCA1/Jaspar

Match Rank:1
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GATAGGCAACCC
-----ACAACAC

PB0033.1_Irf3_1/Jaspar

Match Rank:2
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GATAGGCAACCC
GAGAACCGAAACTG

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GATAGGCAACCC
-ATATGCAAAT-

MA0035.3_Gata1/Jaspar

Match Rank:4
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GATAGGCAACCC
ANAGATAAGAA----

MA0036.2_GATA2/Jaspar

Match Rank:5
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GATAGGCAACCC
NCAGATAAGAANNN-

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:6
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GATAGGCAACCC
NAGATAAGNN----

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GATAGGCAACCC
-TTATGCAAT--

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GATAGGCAACCC
CAGATAAGGN----

PB0133.1_Hic1_2/Jaspar

Match Rank:9
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---GATAGGCAACCC-
NNNNTTGGGCACNNCN

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.50
Offset:2
Orientation:forward strand
Alignment:GATAGGCAACCC-
--AAGGCAAGTGT