Information for 16-CGGATCCTCG (Motif 35)


Reverse Opposite:

p-value:1e-2
log p-value:-6.209e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.00%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets94.0 +/- 0.0bp
Average Position of motif in Background447.6 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0139.1_Irf5_2/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGGATCCTCG-----
NNAATTCTCGNTNAN

PB0077.1_Spdef_1/Jaspar

Match Rank:2
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------CGGATCCTCG
AANNATCCGGATGTNN-

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CGGATCCTCG
CGGAGC----

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CGGATCCTCG-
-ACATCCTGNT

PB0138.1_Irf4_2/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CGGATCCTCG-----
AGTATTCTCGGTTGC

PB0181.1_Spdef_2/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CGGATCCTCG---
GATAACATCCTAGTAG

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CGGATCCTCG
RCCGGAARYN--

MA0056.1_MZF1_1-4/Jaspar

Match Rank:8
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CGGATCCTCG
----TCCCCA

PH0126.1_Obox6/Jaspar

Match Rank:9
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----CGGATCCTCG
AAAAACGGATTATTG

MA0130.1_ZNF354C/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CGGATCCTCG
---ATCCAC-