Information for 4-AATTTTCTGCGG (Motif 4)


Reverse Opposite:

p-value:1e-6
log p-value:-1.592e+01
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif8.00%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets662.5 +/- 221.5bp
Average Position of motif in Background388.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AATTTTCTGCGG
-ATTTCCTGTN-

PB0177.1_Sox7_2/Jaspar

Match Rank:2
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----AATTTTCTGCGG-----
GTGCTAATTGTGTGTGTACGCT

MA0156.1_FEV/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AATTTTCTGCGG
-ATTTCCTG---

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AATTTTCTGCGG
-ATTTCCTGTN-

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:5
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AATTTTCTGCGG--
----TTCTNMGGAA

PB0145.1_Mafb_2/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AATTTTCTGCGG---
ANATTTTTGCAANTN

PH0068.1_Hoxc13/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AATTTTCTGCGG---
NAATTTTACGAGNTNN

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AATTTTCTGCGG
CACTTCCTGT--

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AATTTTCTGCGG--
TTTTTTTTCNNGTN

PH0057.1_Hoxb13/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--AATTTTCTGCGG--
NNAATTTTATTGGNTN