Information for 7-TATTCTATTCTA (Motif 7)


Reverse Opposite:

p-value:1e-6
log p-value:-1.517e+01
Information Content per bp:1.929
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif12.00%
Number of Background Sequences with motif24.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets330.6 +/- 161.4bp
Average Position of motif in Background443.3 +/- 182.3bp
Strand Bias (log2 ratio + to - strand density)4.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TATTCTATTCTA--
----CTATTTTTGG

PB0174.1_Sox30_2/Jaspar

Match Rank:2
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TATTCTATTCTA-
NCGTATTATAATCNTA

MA0497.1_MEF2C/Jaspar

Match Rank:3
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TATTCTATTCTA-----
--TTCTATTTTTAGNNN

PB0023.1_Gata6_1/Jaspar

Match Rank:4
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TATTCTATTCTA----
NNANTCTTATCTNNNNN

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:5
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TATTCTATTCTA
TAATCAATTA--

PB0079.1_Sry_1/Jaspar

Match Rank:6
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---TATTCTATTCTA-
NANTATTATAATTNNN

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TATTCTATTCTA--
CCATTGTATGCAAAT

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TATTCTATTCTA---
---KCTATTTTTRGH

PB0021.1_Gata3_1/Jaspar

Match Rank:9
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----TATTCTATTCTA------
NNTNANTTCTTATCTCTANANN

MA0037.2_GATA3/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TATTCTATTCTA
---TCTTATCT-