Information for 9-TGAGCCGAATCT (Motif 10)


Reverse Opposite:

p-value:1e-73
log p-value:-1.702e+02
Information Content per bp:1.986
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif1.37%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets359.3 +/- 309.6bp
Average Position of motif in Background332.5 +/- 127.5bp
Strand Bias (log2 ratio + to - strand density)2.1
Multiplicity (# of sites on avg that occur together)1.34
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0157.1_Rara_2/Jaspar

Match Rank:1
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TGAGCCGAATCT
NNCNTGACCCCGCTCT

PB0153.1_Nr2f2_2/Jaspar

Match Rank:2
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TGAGCCGAATCT
NNNNTGACCCGGCGCG

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGAGCCGAATCT-
NNAGATNVNWATCTN

PB0035.1_Irf5_1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGAGCCGAATCT--
ATAAACCGAAACCAA

PB0037.1_Isgf3g_1/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TGAGCCGAATCT--
CAAAATCGAAACTAA

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TGAGCCGAATCT
--ANCAGGATGT

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TGAGCCGAATCT
-CAGCC------

MA0038.1_Gfi1/Jaspar

Match Rank:8
Score:0.52
Offset:5
Orientation:forward strand
Alignment:TGAGCCGAATCT---
-----CAAATCACTG

PB0033.1_Irf3_1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TGAGCCGAATCT-
GAGAACCGAAACTG

PB0034.1_Irf4_1/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:forward strand
Alignment:TGAGCCGAATCT---
CGTATCGAAACCAAA