| p-value: | 1e-68 |
| log p-value: | -1.580e+02 |
| Information Content per bp: | 1.985 |
| Number of Target Sequences with motif | 39.0 |
| Percentage of Target Sequences with motif | 1.53% |
| Number of Background Sequences with motif | 5.2 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 432.2 +/- 290.8bp |
| Average Position of motif in Background | 345.5 +/- 196.2bp |
| Strand Bias (log2 ratio + to - strand density) | 2.4 |
| Multiplicity (# of sites on avg that occur together) | 1.41 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
| Match Rank: | 1 |
| Score: | 0.60
| | Offset: | -3
| | Orientation: | forward strand |
| Alignment: | ---ATGCTTGTATGA
GTCATGCHTGRCTGS |
|
|
|
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer
| Match Rank: | 2 |
| Score: | 0.60
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----ATGCTTGTATGA
NGTCACGCTTGGCTGC |
|
|
|
MA0164.1_Nr2e3/Jaspar
| Match Rank: | 3 |
| Score: | 0.59
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | ATGCTTGTATGA
AAGCTTG----- |
|
|
|
MA0042.1_FOXI1/Jaspar
| Match Rank: | 4 |
| Score: | 0.58
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --ATGCTTGTATGA
GGATGTTTGTTT-- |
|
|
|
PB0024.1_Gcm1_1/Jaspar
| Match Rank: | 5 |
| Score: | 0.56
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----ATGCTTGTATGA
NNNNATGCGGGTNNNN |
|
|
|
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer
| Match Rank: | 6 |
| Score: | 0.55
| | Offset: | 3
| | Orientation: | reverse strand |
| Alignment: | ATGCTTGTATGA-
---NTTTTATGAC |
|
|
|
PH0082.1_Irx2/Jaspar
| Match Rank: | 7 |
| Score: | 0.54
| | Offset: | -3
| | Orientation: | forward strand |
| Alignment: | ---ATGCTTGTATGA--
TAAATACATGTAAAATT |
|
|
|
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer
| Match Rank: | 8 |
| Score: | 0.54
| | Offset: | 1
| | Orientation: | forward strand |
| Alignment: | ATGCTTGTATGA----
-CCATTGTATGCAAAT |
|
|
|
PB0170.1_Sox17_2/Jaspar
| Match Rank: | 9 |
| Score: | 0.54
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -ATGCTTGTATGA----
NTTNTATGAATGTGNNC |
|
|
|
PH0068.1_Hoxc13/Jaspar
| Match Rank: | 10 |
| Score: | 0.53
| | Offset: | 1
| | Orientation: | reverse strand |
| Alignment: | ATGCTTGTATGA-----
-NAATTTTACGAGNTNN |
|
|
|
