Information for 15-GTGTACTTTTAA (Motif 15)


Reverse Opposite:

p-value:1e-65
log p-value:-1.506e+02
Information Content per bp:1.530
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif1.33%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets287.9 +/- 232.6bp
Average Position of motif in Background287.8 +/- 55.0bp
Strand Bias (log2 ratio + to - strand density)2.1
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GTGTACTTTTAA-
NNATTGGACTTTNGNN

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:2
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GTGTACTTTTAA
ACTCCAAGTACTTGGAA

PB0198.1_Zfp128_2/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GTGTACTTTTAA-
TGTATATATATACC

PB0146.1_Mafk_2/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GTGTACTTTTAA-
CCTTGCAATTTTTNN

PH0116.1_Nkx2-9/Jaspar

Match Rank:5
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GTGTACTTTTAA
NATTTAAGTACTTNAAA

MA0114.2_HNF4A/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GTGTACTTTTAA---
CTGGACTTTGGACTC

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTGTACTTTTAA
TGTTTACTTT---

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTGTACTTTTAA
TGTTTACTTT---

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GTGTACTTTTAA-----
-TGGACTTTGNNCTNTG

PB0053.1_Rara_1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GTGTACTTTTAA-
NNNGTGACCTTTGNNN