Information for 3-TTCGGTTAGT (Motif 18)


Reverse Opposite:

p-value:1e-48
log p-value:-1.110e+02
Information Content per bp:1.978
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets363.3 +/- 297.2bp
Average Position of motif in Background284.9 +/- 222.1bp
Strand Bias (log2 ratio + to - strand density)3.5
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TTCGGTTAGT
TGTCGGTT---

PB0035.1_Irf5_1/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TTCGGTTAGT
NTGGTTTCGGTTNNN

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTCGGTTAGT
BRRCVGTTDN-

PB0036.1_Irf6_1/Jaspar

Match Rank:4
Score:0.57
Offset:-8
Orientation:reverse strand
Alignment:--------TTCGGTTAGT
NNNTTGGTTTCGNTNNN-

MA0046.1_HNF1A/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TTCGGTTAGT-------
---GGTTAATAATTAAC

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TTCGGTTAGT--
-CAGGTAAGTAT

PB0034.1_Irf4_1/Jaspar

Match Rank:7
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------TTCGGTTAGT
TNTGGTTTCGATACN-

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TTCGGTTAGT
GGCVGTTR--

MA0468.1_DUX4/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TTCGGTTAGT
TGATTAAATTA--

PB0037.1_Isgf3g_1/Jaspar

Match Rank:10
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----TTCGGTTAGT
TNAGTTTCGATTTTN