Information for 2-TCGGGATATAGA (Motif 2)


Reverse Opposite:

p-value:1e-91
log p-value:-2.114e+02
Information Content per bp:1.979
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif1.64%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets389.4 +/- 296.7bp
Average Position of motif in Background482.8 +/- 42.5bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0163.1_Six6_2/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TCGGGATATAGA----
ANNNGGATATATCCNNN

PB0077.1_Spdef_1/Jaspar

Match Rank:2
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TCGGGATATAGA
AANNATCCGGATGTNN-

PB0090.1_Zbtb12_1/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TCGGGATATAGA----
CTAAGGTTCTAGATCAC

MA0156.1_FEV/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TCGGGATATAGA
-CAGGAAAT---

MA0136.1_ELF5/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TCGGGATATAGA
-AAGGAAGTA--

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TCGGGATATAGA
-CCAAAAATAG-

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:TCGGGATATAGA
-AAGGATATNTN

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TCGGGATATAGA
NACAGGAAAT---

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TCGGGATATAGA
ANCAGGATGT---

POL012.1_TATA-Box/Jaspar

Match Rank:10
Score:0.50
Offset:5
Orientation:forward strand
Alignment:TCGGGATATAGA--------
-----GTATAAAAGGCGGGG