Information for 4-RGMCTGTT (Motif 22)


Reverse Opposite:

p-value:1e-36
log p-value:-8.297e+01
Information Content per bp:1.775
Number of Target Sequences with motif1477.0
Percentage of Target Sequences with motif57.81%
Number of Background Sequences with motif21324.6
Percentage of Background Sequences with motif45.34%
Average Position of motif in Targets373.4 +/- 268.6bp
Average Position of motif in Background334.2 +/- 207.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.46
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:RGMCTGTT
--GCTGTG

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer

Match Rank:2
Score:0.67
Offset:3
Orientation:forward strand
Alignment:RGMCTGTT---
---CTGTTTAC

PB0151.1_Myf6_2/Jaspar

Match Rank:3
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----RGMCTGTT---
GGNGCGNCTGTTNNN

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:RGMCTGTT--
BRRCVGTTDN

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:RGMCTGTT-
-GGCVGTTR

MA0146.2_Zfx/Jaspar

Match Rank:6
Score:0.64
Offset:-8
Orientation:forward strand
Alignment:--------RGMCTGTT
GGGGCCGAGGCCTG--

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-RGMCTGTT
TWGTCTGV-

MA0480.1_Foxo1/Jaspar

Match Rank:8
Score:0.63
Offset:1
Orientation:forward strand
Alignment:RGMCTGTT----
-TCCTGTTTACA

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---RGMCTGTT
CNAGGCCT---

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:RGMCTGTT--
TGGCAGTTGG