Information for 11-TAGGCCGC (Motif 25)


Reverse Opposite:

p-value:1e-24
log p-value:-5.530e+01
Information Content per bp:1.530
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif1.72%
Number of Background Sequences with motif103.2
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets341.7 +/- 265.5bp
Average Position of motif in Background331.9 +/- 197.7bp
Strand Bias (log2 ratio + to - strand density)2.7
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-TAGGCCGC
CTAGGCCT-

MA0146.2_Zfx/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TAGGCCGC------
CAGGCCNNGGCCNN

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TAGGCCGC
CNAGGCCT-

POL006.1_BREu/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TAGGCCGC-
-AGCGCGCC

PB0009.1_E2F3_1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TAGGCCGC-----
ATAAGGGCGCGCGAT

PB0008.1_E2F2_1/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TAGGCCGC-----
ATAAAGGCGCGCGAT

PB0094.1_Zfp128_1/Jaspar

Match Rank:7
Score:0.52
Offset:-6
Orientation:reverse strand
Alignment:------TAGGCCGC---
TTNGGGTACGCCNNANN

MA0163.1_PLAG1/Jaspar

Match Rank:8
Score:0.52
Offset:-6
Orientation:reverse strand
Alignment:------TAGGCCGC
CCCCCTTGGGCCCC

PH0015.1_Crx/Jaspar

Match Rank:9
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----TAGGCCGC----
AGGCTAATCCCCAANG

MA0467.1_Crx/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TAGGCCGC--
CTAATCCTCTT