Information for 17-AAACGTTG (Motif 26)


Reverse Opposite:

p-value:1e-16
log p-value:-3.864e+01
Information Content per bp:1.530
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif2.04%
Number of Background Sequences with motif224.9
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets367.0 +/- 276.6bp
Average Position of motif in Background333.1 +/- 207.2bp
Strand Bias (log2 ratio + to - strand density)-1.4
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0044.1_Homez/Jaspar

Match Rank:1
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----AAACGTTG----
NNTAAAAACGATGTTNT

PB0046.1_Mybl1_1/Jaspar

Match Rank:2
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----AAACGTTG----
TTGAAAACCGTTAATTT

PB0045.1_Myb_1/Jaspar

Match Rank:3
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----AAACGTTG----
ATGGAAACCGTTATTTT

PB0131.1_Gmeb1_2/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AAACGTTG----
TNAACGACGTCGNCCA

MA0040.1_Foxq1/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AAACGTTG
AATAAACAATN

MA0133.1_BRCA1/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AAACGTTG-
--GTGTTGN

MA0442.1_SOX10/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AAACGTTG-
---CTTTGT

MA0104.3_Mycn/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AAACGTTG-
-CACGTGGC

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:9
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----AAACGTTG
ANGNAAAGGTCA

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AAACGTTG-
-CACGTGGN