Information for 23-CTAATGTACC (Motif 29)


Reverse Opposite:

p-value:1e-6
log p-value:-1.389e+01
Information Content per bp:1.972
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.35%
Number of Background Sequences with motif18.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets542.9 +/- 379.2bp
Average Position of motif in Background333.1 +/- 192.6bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)6.33
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0132.1_Pdx1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CTAATGTACC
CTAATT----

PB0051.1_Osr2_1/Jaspar

Match Rank:2
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----CTAATGTACC-
CNNNGCTACTGTANNN

MA0025.1_NFIL3/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTAATGTACC--
-TTATGTAACAT

PB0050.1_Osr1_1/Jaspar

Match Rank:4
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CTAATGTACC-
TNNTGCTACTGTNNNN

PB0096.1_Zfp187_1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTAATGTACC-----
-TTATGTACTAATAA

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CTAATGTACC---
---CTGTTCCTGG

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTAATGTACC
CTAATKGV--

MA0158.1_HOXA5/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CTAATGTACC
CACTAATT----

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTAATGTACC
GKTAATGR---

MA0075.1_Prrx2/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTAATGTACC
-TAATT----