Information for 23-TCCTGTGTGCTC (Motif 30)


Reverse Opposite:

p-value:1e-5
log p-value:-1.271e+01
Information Content per bp:1.981
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.23%
Number of Background Sequences with motif7.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets352.5 +/- 239.3bp
Average Position of motif in Background294.7 +/- 187.5bp
Strand Bias (log2 ratio + to - strand density)-4.5
Multiplicity (# of sites on avg that occur together)8.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TCCTGTGTGCTC--
NNNNTTGTGTGCTTNN

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TCCTGTGTGCTC--
NNGCGTGTGTGCNGCN

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TCCTGTGTGCTC------
-NSTGTTTRCWCAGBNNN

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TCCTGTGTGCTC-
-CGTGGGTGGTCC

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TCCTGTGTGCTC
ACTTCCTGTT-----

PB0104.1_Zscan4_1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TCCTGTGTGCTC-----
NTNTATGTGCACATNNN

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TCCTGTGTGCTC
-GCTGTG-----

MA0514.1_Sox3/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TCCTGTGTGCTC
-CCTTTGTTTT-

MA0098.2_Ets1/Jaspar

Match Rank:9
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------TCCTGTGTGCTC
CCCACTTCCTGTCTC---

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TCCTGTGTGCTC
ATTTCCTGTN-----