Information for 25-GTATAGTATAGT (Motif 32)


Reverse Opposite:

p-value:1e-2
log p-value:-5.205e+00
Information Content per bp:1.920
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.08%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets156.8 +/- 97.2bp
Average Position of motif in Background424.0 +/- 130.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)5.50
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0079.1_Sry_1/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTATAGTATAGT----
NANTATTATAATTNNN

MA0040.1_Foxq1/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GTATAGTATAGT
-TATTGTTTATT

PB0174.1_Sox30_2/Jaspar

Match Rank:3
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GTATAGTATAGT----
NCGTATTATAATCNTA

PB0064.1_Sox14_1/Jaspar

Match Rank:4
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GTATAGTATAGT----
NNTAATTATAATTNNN

PB0069.1_Sox21_1/Jaspar

Match Rank:5
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GTATAGTATAGT----
NNTAATTATAATNANN

PB0106.1_Arid5a_2/Jaspar

Match Rank:6
Score:0.51
Offset:-7
Orientation:reverse strand
Alignment:-------GTATAGTATAGT
TNNTTTCGTATTNNANN--

PB0105.1_Arid3a_2/Jaspar

Match Rank:7
Score:0.48
Offset:-4
Orientation:forward strand
Alignment:----GTATAGTATAGT
ACCCGTATCAAATTT-

SA0003.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---GTATAGTATAGT-----
AANGTGAAGNANNGTNAAGG

PB0036.1_Irf6_1/Jaspar

Match Rank:9
Score:0.47
Offset:-1
Orientation:reverse strand
Alignment:-GTATAGTATAGT----
NNNTTGGTTTCGNTNNN

GFY(?)/Promoter/Homer

Match Rank:10
Score:0.46
Offset:0
Orientation:reverse strand
Alignment:GTATAGTATAGT
GGGAATTGTAGT