Information for 5-CTCTTGTAATAT (Motif 5)


Reverse Opposite:

p-value:1e-86
log p-value:-1.995e+02
Information Content per bp:1.986
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif1.57%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets370.1 +/- 275.4bp
Average Position of motif in Background313.3 +/- 185.2bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0129.1_Glis2_2/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CTCTTGTAATAT-
TCTTTANTAATANN

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTCTTGTAATAT---
-NNTNNCAATATTAG

PH0048.1_Hoxa13/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CTCTTGTAATAT--
AAACCTCGTAAAATTT

PB0187.1_Tcf7_2/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTCTTGTAATAT--
NNNTTTNTAATACNG

PH0068.1_Hoxc13/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CTCTTGTAATAT--
AAAGCTCGTAAAATTT

PB0119.1_Foxa2_2/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTCTTGTAATAT--
NCNTTTGTTATTTNN

PB0174.1_Sox30_2/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTCTTGTAATAT--
NCGTATTATAATCNTA

MA0025.1_NFIL3/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CTCTTGTAATAT
-TTATGTAACAT

PB0079.1_Sry_1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CTCTTGTAATAT--
TATAATTATAATATTC

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTCTTGTAATAT
-TTATGCAAT--