Information for 6-TAATAAGTGGAC (Motif 7)


Reverse Opposite:

p-value:1e-79
log p-value:-1.824e+02
Information Content per bp:1.983
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif1.64%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets377.4 +/- 283.7bp
Average Position of motif in Background506.1 +/- 41.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0122.1_Nkx3-2/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:forward strand
Alignment:TAATAAGTGGAC
--TTAAGTGGA-

PH0027.1_Emx2/Jaspar

Match Rank:2
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----TAATAAGTGGAC
ACCACTAATTAGTGGAC

PH0031.1_Evx1/Jaspar

Match Rank:3
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----TAATAAGTGGAC
AGAACTAATTAGTGGAC

PH0039.1_Mnx1/Jaspar

Match Rank:4
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----TAATAAGTGGAC
GTACTAATTAGTGGCG

PH0004.1_Nkx3-2/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TAATAAGTGGAC---
NTNNTTAAGTGGTTANN

PH0175.1_Vax2/Jaspar

Match Rank:6
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TAATAAGTGGAC
GNCTTAATTAGTGNNN

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TAATAAGTGGAC---
NTNNTTAAGTGGNTNAN

PH0030.1_Esx1/Jaspar

Match Rank:8
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------TAATAAGTGGAC
ATCCATTAATTAATTGA-

PH0003.1_Arx/Jaspar

Match Rank:9
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TAATAAGTGGAC
TNCATTAATTAATGNAC

PH0097.1_Lhx6_2/Jaspar

Match Rank:10
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------TAATAAGTGGAC
NNNCGCTAATTAGNNGA-