Information for 8-GGTGAATTCAGT (Motif 9)


Reverse Opposite:

p-value:1e-76
log p-value:-1.752e+02
Information Content per bp:1.919
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif2.19%
Number of Background Sequences with motif18.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets372.3 +/- 284.8bp
Average Position of motif in Background353.9 +/- 220.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)2.88
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0171.1_Sox18_2/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GGTGAATTCAGT--
NNNNTGAATTCANNNC

MA0479.1_FOXH1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGTGAATTCAGT
TGTGGATTNNN-

PB0068.1_Sox1_1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGTGAATTCAGT----
AATCAATTCAATAATT

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGTGAATTCAGT
NNTGTGGATTSS--

PH0037.1_Hdx/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GGTGAATTCAGT---
AAGGCGAAATCATCGCA

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGTGAATTCAGT
NGATGACGTCAT-

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGTGAATTCAGT
NRRTGACGTCAT-

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGTGAATTCAGT
NGRTGACGTCAY-

PB0091.1_Zbtb3_1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GGTGAATTCAGT------
-NNNANTGCAGTGCNNTT

PB0005.1_Bbx_1/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GGTGAATTCAGT------
---TAATTCAATGAAGTG