Information for 1-TCCSGCTCCCGC (Motif 1)


Reverse Opposite:

p-value:1e-10
log p-value:-2.508e+01
Information Content per bp:1.781
Number of Target Sequences with motif107.0
Percentage of Target Sequences with motif17.04%
Number of Background Sequences with motif3648.6
Percentage of Background Sequences with motif8.63%
Average Position of motif in Targets525.1 +/- 290.9bp
Average Position of motif in Background390.0 +/- 453.3bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0469.1_E2F3/Jaspar

Match Rank:1
Score:0.74
Offset:5
Orientation:forward strand
Alignment:TCCSGCTCCCGC--------
-----CTCCCGCCCCCACTC

POL011.1_XCPE1/Jaspar

Match Rank:2
Score:0.74
Offset:4
Orientation:reverse strand
Alignment:TCCSGCTCCCGC--
----GGTCCCGCCC

MA0471.1_E2F6/Jaspar

Match Rank:3
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:TCCSGCTCCCGC--
---NCTTCCCGCCC

MA0024.2_E2F1/Jaspar

Match Rank:4
Score:0.73
Offset:4
Orientation:reverse strand
Alignment:TCCSGCTCCCGC---
----CCTCCCGCCCN

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:TCCSGCTCCCGC-
---NYTTCCCGCC

MA0470.1_E2F4/Jaspar

Match Rank:6
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:TCCSGCTCCCGC--
---NNTTCCCGCCC

PB0010.1_Egr1_1/Jaspar

Match Rank:7
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TCCSGCTCCCGC---
-TCCGCCCCCGCATT

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.68
Offset:4
Orientation:forward strand
Alignment:TCCSGCTCCCGC
----GCTCCG--

MA0162.2_EGR1/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TCCSGCTCCCGC-
CCCCCGCCCCCGCC

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:10
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TCCSGCTCCCGC--
--VDTTTCCCGCCA